Job Description P76321 Confidence 99.47% Date Thu Jan 5 12:21:47 GMT 2012 Rank 27 Aligned Residues 157 % Identity 22% Template d1xkua_ SCOP info Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like Ngr ectodomain-like Resolution 2.15

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																			.																						.	.	.	.	.																				.	.	.	.
Query SS confidence																			.																						.	.	.	.	.																				.	.	.	.
Query Sequence		H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	.	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	.	.	.	.	.	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	.	.	.	.	S	D	G	I	T	Q	V	S	V	D	N	N	L
Query Conservation																			.																						.	.	.	.	.																				.	.	.	.
Alig confidence																			.																						.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		H	L	R	V	V	Q	C	S	D	L	G	L	E	K	V	P	K	D	L	P	P	D	T	A	L	L	D	L	Q	N	N	K	I	T	E	I	K	D	G	D	F	K	N	L	K	N	L	H	T	L	I	L	I	N	N	K	I	S	K	I	S	P	G	A	F	A	P	L	V	K	L	E	R	L	Y	L	S	K	N	Q
Template Known Secondary structure			T	T					T	T	S				S				S			T	T								S	S					B		T	T	T	T	T	T		T	T								S	S					B		T	T	T	T	T	T		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		85	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	E	L	P	E	K	M	P	K	T	L	Q	E	L	R	V	H	E	N	E	I	T	K	V	R	K	S	V	F	N	G	L	N	Q	M	I	V	V	E	L	G	T	N	P	L	K	S	S	G	I	E	N	G	A	F	Q	G	M	K	K	L	S	Y	I	R	I	A	D	T	N	I	T	T	I	P	Q	G	L	P
Template Known Secondary structure			S	B			S	S			T	T								S	S				B	B						T	T		T	T								S	S				G	G	G	B		T	T	G	G	G	G		T	T								S	S				S			S	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
																																												87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	D	S	S	P	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	P	.	.	.	E	T	T	K	L	F	N	C	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		P	S	L	T	E	L	H	L	D	G	N	K	I	T	K	V	D	A	A	S	L	K	G	L	N	N	L	A	K	L	G	L	S	F	N	S	I	S	A	V	D	N	G	S	L	A	N	T	P	H	L	R	E	L	H	L	N	N	N	K	L	V	K	V	P	G	G	L	A	D	H	K	Y	I	Q	V	V	Y	L	H
Template Known Secondary structure		T	T		S					T	T	S							T	G	G	G	T	T		T	T								S	S							T	T	T	G	G	G	S	T	T								S	S			S	S			T	T	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E	L	L	F	.	.	.	K	E	C	N	S	F	E	E	T	F	L	Y	H	G	L
Query Conservation																																							.	.	.
Alig confidence											.	.																											.	.	.
Template Conservation											.	.
Template Sequence		N	N	N	I	S	A	I	G	S	.	.	N	D	F	C	P	P	G	Y	N	T	K	K	A	S	Y	S	G	V	S	L	F	S	N	P	V	Q	Y	W	E	I	Q	P	S	T	F	R	C	V	Y	V	R	A	A	V
Template Known Secondary structure		S	S							T	.	.	T	S	S	S		S	S			T	T	S				S						S	S	S	S		G	G	G	S		G	G	G	G	T	T				G	G	G
Template Predicted Secondary structure											.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions