Job Description P76321 Confidence 99.19% Date Thu Jan 5 12:21:47 GMT 2012 Rank 42 Aligned Residues 144 % Identity 14% Template d1ozna_ SCOP info Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like Ngr ectodomain-like Resolution 1.52

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80
Predicted Secondary structure																							.																						.	.	.	.	.																				.	.	.	.
Query SS confidence																							.																						.	.	.	.	.																				.	.	.	.
Query Sequence		C	V	E	L	H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	.	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	.	.	.	.	.	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	.	.	.	.	S	D	G	I	T	Q	V	S	V
Query Conservation																							.																						.	.	.	.	.																				.	.	.	.
Alig confidence																							.																						.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		C	Y	N	E	P	K	V	T	T	S	C	P	Q	Q	G	L	Q	A	V	P	V	G	I	P	A	A	S	Q	R	I	F	L	H	G	N	R	I	S	H	V	P	A	A	S	F	R	A	C	R	N	L	T	I	L	W	L	H	S	N	V	L	A	R	I	D	A	A	A	F	T	G	L	A	L	L	E	Q	L	D	L
Template Known Secondary structure					S	S	S							S	S			S	S			T	T			T	T		S					T	T	S							T	T	T	T	T	T		T	T								S	S							T	T	T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		81	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	N	L	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	N	A	Q	L	R	S	V	D	P	A	T	F	H	G	L	G	R	L	H	T	L	H	L	D	R	C	G	L	Q	E	L	G	P	G	L	F	R	G	L	A	A	L	Q	Y	L	Y	L	Q	D	N	A	L	Q	A	L	P	D	D	T	F	R	D	L	G	N	L	T	H	L	F	L	H	G	N	R	I	S	S
Template Known Secondary structure			S		T	T						T	T	T	T	T	T		T	T							T	T	S							T	T	T	T	T	T		T	T								S	S							T	T	T	T	T	T		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
					87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																											.	.	.	.
Query SS confidence		.	.	.																											.	.	.	.
Query Sequence		.	.	.	R	V	D	S	S	P	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	P	.	.	.	.	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E	L	L	F	K
Query Conservation		.	.	.																											.	.	.	.
Alig confidence		.	.	.																											.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.
Template Sequence		V	P	E	R	A	F	R	G	L	H	S	L	D	R	L	L	L	H	Q	N	R	V	A	H	V	H	P	H	A	F	R	D	L	G	R	L	M	T	L	Y	L	F	A	N	N	L	S	A	L	P	T	E	.	.	.	.	.	.	.	.	A	L	A	P	L	R	A	L	Q	Y	L	R	L	N	D	N	P	W	V	C
Template Known Secondary structure				T	T	T	T	T	T		T	T								S	S							T	T	T	T	T	T		T	T								S	S			S						.	.	.	.	.	.	.	.			T	T		T	T								S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.									.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	C	R
Template Known Secondary structure		S	G	G
Template Predicted Secondary structure
Template SS confidence
		265	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions