Job Description P76321 Confidence 97.58% Date Thu Jan 5 12:21:47 GMT 2012 Rank 70 Aligned Residues 117 % Identity 9% Template d1koha1 SCOP info Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like mRNA export factor tap Resolution 3.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure														.	.	.	.																																																.	.	.	.	.	.
Query SS confidence														.	.	.	.																																																.	.	.	.	.	.
Query Sequence		S	W	I	E	V	L	Y	L	R	H	N	G	.	.	.	.	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	S	S	P	.	.	.	.	.	.	S	K	A	M	T	I	S	I	Y	R	N
Query Conservation														.	.	.	.																																																.	.	.	.	.	.
Alig confidence														.	.	.	.																																																.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	Q	Q	A	L	D	L	K	G	L	R	S	D	P	D	L	V	A	Q	N	I	D	V	V	L	N	R	R	S	S	M	A	A	T	L	R	I	I	E	E	N	I	P	E	L	L	S	L	N	L	S	N	N	R	L	Y	R	L	D	D	M	S	S	I	V	Q	K	A	P	N	L	K	I	L	N	L	S	G	N
Template Known Secondary structure		S	S	S			B						S	S		T	T	T	T	T	T	T					T	T	S																T	T								S	S						S	G	G	G	T					S	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		104	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		K	I	W	X	I	P	A	M	P	.	.	.	.	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																								.
Template Conservation																																						.
Template Sequence		E	L	K	S	E	R	E	L	D	K	I	K	G	L	K	L	E	E	L	W	L	D	G	N	S	L	S	D	T	F	R	D	Q	S	T	Y	.	I	S	A	I	R	E	R	F	P	K	L	L	R	L	D
Template Known Secondary structure						G	G	G					T	T				S	S				T	T	S	T	T	S	S	S	S	S	S					.						T	T	S	T	T					T
Template Predicted Secondary structure																																						.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions