Job Description P76321 Confidence 89.86% Date Thu Jan 5 12:21:47 GMT 2012 Rank 80 Aligned Residues 158 % Identity 9% Template d1fs2a2 SCOP info Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like Cyclin A/CDK2-associated p19, Skp2 Resolution 2.90

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		15	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.
Predicted Secondary structure														.	.								.	.	.																.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence														.	.								.	.	.																.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		H	N	S	K	L	D	L	T	D	L	H	L	.	.	G	S	L	P	P	L	P	.	.	.	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	.	.	.	.	.	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	.	.	.	.	.	.	S	D	G	I	T	Q	V
Query Conservation														.	.								.	.	.																.	.	.	.	.																								.	.	.	.	.	.
Alig confidence														.	.								.	.	.																.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	Q	H	M	D	L	S	N	S	V	I	E	V	S	T	L	H	G	I	L	S	Q	C	S	K	L	Q	N	L	S	L	E	G	L	R	L	S	D	P	I	V	N	T	L	A	K	N	S	N	L	V	R	L	N	L	S	G	C	S	G	F	S	E	F	A	L	Q	T	L	L	S	S	C	S	R	L	D	E	L
Template Known Secondary structure			G	G	G	S	S	T	T	S	S												T	T		S			S					T	T		B										T	T		T	T							T	T		B	S														T	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		79	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		S	V	D	N	N	L	I	S	R	V	D	.	.	.	.	.	.	.	S	S	P	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	S	W	C	F	D	F	T	E	K	H	V	Q	V	A	V	A	H	V	S	E	T	I	T	Q	L	N	L	S	G	Y	R	K	N	L	Q	K	S	D	L	S	T	L	V	R	R	C	P	N	L	V	H	L	D	L	S	D	S	V	M	L	K	N	D	C	F	Q	E	F	F	Q	L	N	Y	L	Q	H	L	S
Template Known Secondary structure							T	T													S		T	T										T	T	T														T	T							T	T		T	T			G	G	G					T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		152	.	.	.	.	.									.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.
Query Sequence		S	N	K	E	L	L	.	.	.	.	.	.	.	.	F	K	E	C	N	S	F	E	E	T	F	L	Y	H	G
Query Conservation								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	R	C	Y	D	I	I	P	E	T	L	L	E	L	G	E	I	P	T	L	K	T	L	Q	V	F	G	I
Template Known Secondary structure			T	T		T	T	S		G	G	G	G	G	G	G	G	G		T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions