Job Description P76321 Confidence 99.29% Date Thu Jan 5 12:21:47 GMT 2012 Rank 38 Aligned Residues 122 % Identity 19% Template c3rg1I_ PDB info PDB header:immune system Chain: I: PDB Molecule:cd180 molecule; PDBTitle: crystal structure of the rp105/md-1 complex Resolution 2.91 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		E	L	H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	.	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	S	S
Query Conservation																					.
Alig confidence																					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	G	N	R	T	Y	N	C	E	N	L	G	L	R	E	I	P	D	T	L	P	N	T	T	E	V	L	E	F	S	F	N	F	L	P	T	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	T	F	S	R	L	I	N	L	I	F	L	D	L	T	R	C	Q	I	N	W	V	H	E	D
Template Known Secondary structure				T	T	T					T	T	S			S	S			T	T	S		T	T								S				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	S	S		T	T		S					T	T	S							T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		92					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																					.	.	.	.
Query SS confidence			.	.	.	.																					.	.	.	.
Query Sequence		P	.	.	.	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	P	.	.	.	.	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E	L	L
Query Conservation			.	.	.	.																					.	.	.	.
Alig confidence			.	.	.	.																					.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		T	F	Q	S	H	H	Q	L	N	T	I	V	L	T	G	N	P	L	I	F	M	A	E	T	S	L	T	G	P	K	F	L	K	H	L	F	L	T	Q	T	G	I	S	N	L	E	F	I	.	.	.	.	.	.	.	.	P	V	H	N	L	E	N	L	E	S	L	H	L	G	S	N	H	I
Template Known Secondary structure		T	T	T	T		T	T							T	T								T	T	T	T				S								T	T	S					G	G	G	S	.	.	.	.	.	.	.	.			T	T		T	T		S					T	T	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.									.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions