Job Description P76321 Confidence 99.56% Date Thu Jan 5 12:21:47 GMT 2012 Rank 20 Aligned Residues 151 % Identity 15% Template c3ojaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex Resolution 2.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																				.	.																																						.
Query SS confidence																				.	.																																						.
Query Sequence		H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	L	.	.	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	.	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	S	S
Query Conservation																				.	.																																						.
Alig confidence																				.	.																																						.
Template Conservation
Template Sequence		K	L	E	L	L	N	L	S	S	N	V	L	Y	E	T	L	D	L	E	S	L	S	T	L	R	T	L	D	L	N	N	N	Y	V	Q	E	L	L	V	G	P	S	I	E	T	L	H	A	A	N	N	N	I	S	R	V	S	C	S	R	G	Q	G	K	K	N	I	Y	L	A	N	N	K	I	T	M	L	R	D	L
Template Known Secondary structure		T							T	T	S									T	T		T	T								S	S									T	T								S	S											S	S								S	S				S	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		92					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.
Predicted Secondary structure			.	.	.	.																		.	.																																																	.	.	.	.	.	.
Query SS confidence			.	.	.	.																		.	.																																																	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	.	.	A	M	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E	L	L	.	.	.	.	.	.	F	K
Query Conservation			.	.	.	.																		.	.																																																	.	.	.	.	.	.
Alig confidence			.	.	.	.																		.	.																								.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		D	E	G	C	R	S	R	V	Q	Y	L	D	L	K	L	N	E	I	D	T	V	N	F	A	E	L	A	A	S	S	D	T	L	E	H	L	N	L	Q	Y	N	F	I	Y	D	V	K	.	.	.	.	.	.	.	G	Q	V	V	F	A	K	L	K	T	L	D	L	S	S	N	K	L	A	F	M	G	P	E	F	Q
Template Known Secondary structure			G	G	G	G	S	S							T	T	S							G	G	G	G	G	G	G	T	T	T							T	T	S							.	.	.	.	.	.	.						T	T								S	S							G	G	G	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	N	S	F	E	E	T	F	L	Y	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	A	G	V	T	W	I	S	L	R	N	N
Template Known Secondary structure		G	G	T	T		S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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