Job Description P76321 Confidence 99.65% Date Thu Jan 5 12:21:47 GMT 2012 Rank 11 Aligned Residues 120 % Identity 10% Template c3j0aB_ PDB info PDB header:immune system Chain: B: PDB Molecule:toll-like receptor 5; PDBTitle: homology model of human toll-like receptor 5 fitted into an electron2 microscopy single particle reconstruction Resolution 26.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.
Predicted Secondary structure																																																																								.							.	.	.
Query SS confidence																																																																								.							.	.	.
Query Sequence		S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	.	R	V	D	S	S	P	.	.	.
Query Conservation																																																																								.							.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.							.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	A	F	Y	R	F	C	N	L	T	Q	V	P	Q	V	L	N	T	T	E	R	L	L	L	S	F	N	Y	I	R	T	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	S	F	P	F	L	E	Q	L	Q	L	L	E	L	G	S	Q	Y	T	P	L	T	I	D	K	E	A	F	R	N
Template Known Secondary structure							S				S	S			T	T	S		T	T								S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S		S	S			S		S						T	T								S	S	T	T	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
			93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.																				.	.	.	.
Query SS confidence		.																				.	.	.	.
Query Sequence		.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	.	.	.	.	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E	L	L
Query Conservation		.																				.	.	.	.
Alig confidence		.																				.	.	.	.																										.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		L	P	N	L	R	I	L	D	L	G	S	S	K	I	Y	F	L	H	P	D	A	F	Q	G	L	F	H	L	F	E	L	R	L	Y	F	C	G	L	S	D	A	V	L	K	D	G	Y	F	R	.	.	.	.	.	.	N	L	K	A	L	T	R	L	D	L	S	K	N	Q	I
Template Known Secondary structure			T	T							T	T					B			T	T	S	S		S		S	S							T	T				S	S			S	T	T				S	.	.	.	.	.	.	S		S	S								S
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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