Job Description P76321 Confidence 98.04% Date Thu Jan 5 12:21:47 GMT 2012 Rank 66 Aligned Residues 133 % Identity 32% Template c3gozA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:leucine-rich repeat-containing protein; PDBTitle: crystal structure of the leucine-rich repeat-containing2 protein legl7 from legionella pneumophila. northeast3 structural genomics consortium target lgr148 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	.	.	.	.	.	.	.	.	.	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	T	S	L	D	L	S	L	N	N	L	Y	S	I	S	T	V	E	L	I	Q	A	F	A	N	T	P	A	S	V	T	S	L	N	L	S	G	N	S	L	G	F	K	N	S	D	E	L	V	Q	I	L	A	A	I	P	A	N	V	T	S	L	N	L	S	G	N	F	L	S	Y	K	S	S	D	E	L	V	K
Template Known Secondary structure		T							T	T	S		G	G	G	S											T			T	T								S	S		G	G	G	S											T	S		T	T								S	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	A	A	I	P	F	T	I	T	V	L	D	L	G	W	N	D	F	S	S	K	S	S	S	E	F	K	Q	A	F	S	N	L	P	A	S	I	T	S	L	N	L	R	G	N	D	L	G	I	K	S	S	D	E	L	I	Q	I	L	A	A	I	P	A	N	V	N	S	L	N	L	R	G	N	N	L	A	S	K
Template Known Secondary structure					T	S		T	T								S	S		G	G	G	S										T	T	S		T	T							T	T	S		G	G	G	S											T	S		T	T							T	T	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
																		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	.	.	.	.	.	.	.	.	S	S	P	S	K	A	M	T	I	S	I	Y	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	C	A	E	L	A	K	F	L	A	S	I	P	A	S	V	T	S	L	D	L	S	A	N	L	L	G	L	K	S	Y	A	E	L	A	Y	I	F	S	S	I	P	N	H	V	V	S	L	N	L	C	L	N	C	L	H	G	P	S	L	E	N	L	K	L	L	K	D	S	L	K	H	L	Q	T	V	Y	L	D	Y
Template Known Secondary structure												T	S		T	T							T	T	S		G	G	G	S												S		T	T								S	S													T	T	T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		103	.	.	.	.	.	.									110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		N	K	I	W	X	I	P	.	.	.	.	.	.	.	.	A	M	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	.	.	.	.	.	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V
Query Conservation									.	.	.	.	.	.	.	.																						.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		D	I	V	K	N	X	S	K	E	Q	C	K	A	L	G	A	A	F	P	N	I	Q	K	I	I	L	V	D	K	N	G	K	E	I	H	P	S	H	S	I	P	I	S	N	L	I	R	E	L	S	G	K	A	D	V	P	S	L
Template Known Secondary structure					T	T											T	T	S	T	T									T	T	S		B			G	G	G													T				T	T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions