Job Description P76321 Confidence 99.30% Date Thu Jan 5 12:21:47 GMT 2012 Rank 36 Aligned Residues 104 % Identity 21% Template c3g3aA_ PDB info PDB header:hydrolase/immune system Chain: A: PDB Molecule:variable lymphocyte receptor vlrb.2d; PDBTitle: structure of a lamprey variable lymphocyte receptor in2 complex with a protein antigen Resolution 2.20 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																			.																				.	.	.	.	.																				.	.	.	.
Query SS confidence																			.																				.	.	.	.	.																				.	.	.	.
Query Sequence		H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	.	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	.	.	.	.	.	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	.	.	.	.	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L
Query Conservation																			.																				.	.	.	.	.																				.	.	.	.
Alig confidence																			.																				.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		S	G	T	T	V	D	C	S	G	K	S	L	A	S	V	P	T	G	I	P	T	T	T	Q	V	L	Y	L	Y	D	N	Q	I	T	K	L	E	P	G	V	F	D	R	L	T	Q	L	T	R	L	D	L	D	N	N	Q	L	T	V	L	P	A	G	V	F	D	K	L	T	Q	L	T	Q	L	S	L	N	D	N	Q
Template Known Secondary structure			T	T						S	S			S	S			S				T	T								S	S							T	T	T	T	T	T		T	T		S						S	S							T	T	T	T	T	T		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		I	S	R	V	D	S	S	P	.	.	.	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	P	E	T	T	K	L	F
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		L	K	S	I	P	R	G	A	F	D	N	L	K	S	L	T	H	I	W	L	L	N	N	P	W	D	C	A	C	S	D	I	L	Y	L	S	R	W
Template Known Secondary structure							T	T	T	T	T	T		T	T								S	S		B		T	T	B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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