Job Description P76321 Confidence 99.04% Date Thu Jan 5 12:21:47 GMT 2012 Rank 46 Aligned Residues 96 % Identity 17% Template c3bz5A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:internalin-j; PDBTitle: functional domain of inlj from listeria monocytogenes2 includes a cysteine ladder Resolution 2.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																					.	.																		.
Query SS confidence																				.	.																					.	.																		.
Query Sequence		H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	L	.	.	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	.	.	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	.	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D
Query Conservation																				.	.																					.	.																		.
Alig confidence																				.	.																					.	.																		.
Template Conservation
Template Sequence		T	L	T	S	L	D	C	H	N	S	S	I	T	D	M	T	G	I	E	K	L	T	G	L	T	K	L	I	C	T	S	N	N	I	T	T	L	D	L	S	Q	N	T	N	L	T	Y	L	A	C	D	S	N	K	L	T	N	L	D	V	T	P	L	T	K	L	T	Y	L	N	C	D	T	N	K	L	T	K	L	D
Template Known Secondary structure		T								S	S						T	T	G	G	G		T	T		S						S	S			S					T	T		T	T		S						S	S			S					T	T		T	T								S	S			S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		S	S	P	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		V	S	Q	N	P	L	L	T	Y	L	N	C	A	R	N	T	L	T	E	I	D	V
Template Known Secondary structure			T	T		T	T							T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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