Job Description P76321 Confidence 98.70% Date Thu Jan 5 12:21:47 GMT 2012 Rank 63 Aligned Residues 101 % Identity 16% Template c2z66A_ PDB info PDB header:immune system Chain: A: PDB Molecule:variable lymphocyte receptor b, toll-like receptor 4; PDBTitle: crystal structure of the vt3 hybrid of human tlr4 and hagfish vlrb.61 Resolution 1.90 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																	.																																																														.	.	.
Query SS confidence																	.																																																														.	.	.
Query Sequence		S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	.	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	S	S	P	.	.	.
Query Conservation																	.																																																														.	.	.
Alig confidence																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	I	R	C	N	S	K	G	L	T	S	V	P	T	G	I	P	S	S	A	T	R	L	E	L	E	S	N	K	L	Q	S	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	V	F	D	K	L	T	Q	L	T	K	L	S	L	S	S	N	G	L	S	F	K	G	C	C	S	Q	S	D
Template Known Secondary structure		T						S	S			S	S			S				T	T								S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T		T	T		S						S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
					93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		F	G	T	T	S	L	K	Y	L	D	L	S	F	N	G	V	I	T	M	S	S	N	F	L	G	L	E	Q	L	E	H	L	D	F	Q	H	S	N	L	K	Q	M	S
Template Known Secondary structure			S		S									S		S										T		T	T							T	T	S				S	S	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions