Job Description P76321 Confidence 99.39% Date Thu Jan 5 12:21:47 GMT 2012 Rank 33 Aligned Residues 140 % Identity 18% Template c2v9sC_ PDB info PDB header:structural protein Chain: C: PDB Molecule:slit homolog 2 protein n-product; PDBTitle: second lrr domain of human slit2 Resolution 2.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																			.																				.	.	.	.	.																						.	.	.	.
Query SS confidence																			.																				.	.	.	.	.																						.	.	.	.
Query Sequence		H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	.	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	.	.	.	.	.	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	.	.	.	.	S	D	G	I	T	Q	V	S	V	D	N	N	L
Query Conservation																			.																				.	.	.	.	.																						.	.	.	.
Alig confidence																			.																				.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		S	N	N	I	V	D	C	R	G	K	G	L	T	E	I	P	T	N	L	P	E	T	I	T	E	I	R	L	E	Q	N	T	I	K	V	I	P	P	G	A	F	S	P	Y	K	K	L	R	R	I	D	L	S	N	N	Q	I	S	E	L	A	P	D	A	F	Q	G	L	R	S	L	N	S	L	V	L	Y	G	N	K
Template Known Secondary structure			T	T					T	T	S				S				S			T	T								S	S							T	T	S	S	T	T		T	T							T	T	S							T	T	T	T	T	T		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																					.	.	.
Query SS confidence										.	.	.	.																					.	.	.
Query Sequence		I	S	R	V	D	S	S	P	.	.	.	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	P	.	.	.	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E	L	L
Query Conservation										.	.	.	.																					.	.	.
Alig confidence										.	.	.	.																					.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		I	T	E	L	P	K	S	L	F	E	G	L	F	S	L	Q	L	L	L	L	N	A	N	K	I	N	L	R	V	D	A	F	Q	D	L	H	N	L	N	L	L	S	L	Y	D	N	K	L	Q	T	I	A	K	G	.	.	.	.	.	.	.	.	T	F	S	P	L	R	A	I	Q	T	M	H	L	A	Q	N	P	F
Template Known Secondary structure							T	T	T	T	T	T		T	T								S	S						G	G	G	G	T	T		T	T								S	S			S				T	T	.	.	.	.	.	.	.	.	S	S	T	T		T	T								S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.									.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		158	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	E	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	D	C	H
Template Known Secondary structure				S	G	G
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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