Job Description P76321 Confidence 99.42% Date Thu Jan 5 12:21:47 GMT 2012 Rank 31 Aligned Residues 140 % Identity 14% Template c2v70D_ PDB info PDB header:structural protein Chain: D: PDB Molecule:slit homolog 2 protein n-product; PDBTitle: third lrr domain of human slit2 Resolution 3.01 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																			.																						.	.	.	.	.	.																				.	.	.	.
Query SS confidence																			.																						.	.	.	.	.	.																				.	.	.	.
Query Sequence		H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	.	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	.	.	.	.	.	.	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	.	.	.	.	S	D	G	I	T	Q	V	S	V	D	N	N
Query Conservation																			.																						.	.	.	.	.	.																				.	.	.	.
Alig confidence																			.																						.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		E	G	T	T	V	D	C	S	N	Q	K	L	N	K	I	P	E	H	I	P	Q	Y	T	A	E	L	R	L	N	N	N	E	F	T	V	L	E	A	T	G	I	F	K	K	L	P	Q	L	R	K	I	N	F	S	N	N	K	I	T	D	I	E	E	G	A	F	E	G	A	S	G	V	N	E	I	L	L	T	S	N
Template Known Secondary structure			T	T						S	S			S	S			S				T	T		S						S	S										G	G	G	G		T	T								S	S							T	T	T	T	T	T		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
		84	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																								.	.	.	.
Query SS confidence								.	.	.	.																								.	.	.	.
Query Sequence		L	I	S	R	V	D	.	.	.	.	S	S	P	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	P	.	.	.	.	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E
Query Conservation								.	.	.	.																								.	.	.	.
Alig confidence								.	.	.	.																								.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		R	L	E	N	V	Q	H	K	M	F	K	G	L	E	S	L	K	T	L	M	L	R	S	N	R	I	T	C	V	G	N	D	S	F	I	G	L	S	S	V	R	L	L	S	L	Y	D	N	Q	I	T	T	V	A	P	G	.	.	.	.	.	.	.	.	A	F	D	T	L	H	S	L	S	T	L	N	L	L	A	N
Template Known Secondary structure								G	G	G	G	T	T		S	S							T	T	S					B		T	T	S	S	T	T		T	T		S					T	T						B		T	T	.	.	.	.	.	.	.	.	T	T	T	T		T	T								S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.									.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
		156	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	F	K	E	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	N	C	N	C	Y
Template Known Secondary structure						S	G	G
Template Predicted Secondary structure
Template SS confidence
		665	.	.	.	.	670	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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