Job Description P76321 Confidence 97.72% Date Thu Jan 5 12:21:47 GMT 2012 Rank 69 Aligned Residues 142 % Identity 13% Template c2ra8A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein q64v53_bacfr; PDBTitle: crystal structure of the q64v53_bacfr protein from bacteroides2 fragilis. northeast structural genomics consortium target bfr43 Resolution 1.95 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.														.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.															.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.															.	.	.	.	.	.
Query Sequence		H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	.	.	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	.	.	.	.	.	.	F	P	K	V	S	D
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.															.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		H	F	E	G	L	F	W	G	D	I	D	F	E	E	Q	E	I	S	W	I	E	Q	V	D	L	S	P	V	L	D	A	X	P	L	L	N	N	L	K	I	K	G	T	N	N	L	S	I	G	K	K	P	R	P	N	L	K	S	L	E	I	I	S	G	G	L	P	D	S	V	V	E	D	I	L	G	S	D	L	P
Template Known Secondary structure		T		S									T	T	T			G	G	G		B			B							T		T	T										B	T		B			S		B		T	T		S							S	B												S	B		T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.														90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.								.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	P	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	.	.	.	.	.	.	.	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		N	L	E	K	L	V	L	Y	V	G	V	E	D	Y	G	F	D	G	D	X	N	V	F	R	P	L	F	S	K	D	R	F	P	N	L	K	W	L	G	I	V	D	A	E	E	Q	N	V	V	V	E	X	F	L	E	S	D	I	L	P	Q	L	E	T	X	D	I	S	A	G	V	L	T	D	E	.	.	.	.	G
Template Known Secondary structure		T									B		G	G	G	T			S		G	G	G	T	G	G	G	S		T	T	T		T	T								S		T	T												S	S	G	G	G		S						S	S			B			.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E	L	L	F	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	L	L	L	D	H	V	D	K	I	K	H	L	K	F	I	N	X	K	Y	N	Y	L	S	D	E
Template Known Secondary structure							T	T					T	T		S						S	B	B
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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