Job Description P76321 Confidence 91.85% Date Thu Jan 5 12:21:47 GMT 2012 Rank 79 Aligned Residues 79 % Identity 10% Template c2p1nE_ PDB info PDB header:signaling protein Chain: E: PDB Molecule:transport inhibitor response 1 protein; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase Resolution 2.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.						.
Predicted Secondary structure																						.	.	.	.																																																			.	.	.	.	.
Query SS confidence																						.	.	.	.																																																			.	.	.	.	.
Query Sequence		L	H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	L	P	.	.	.	.	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	.	.	.	.	.	L
Query Conservation																						.	.	.	.																																																			.	.	.	.	.
Alig confidence																						.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	L	R	R	L	S	L	S	G	L	L	T	D	K	V	F	E	Y	I	G	T	Y	A	K	K	M	E	M	L	S	V	A	F	A	G	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	G	M	H	H	V	L	S	G	C	D	S	L	R	K	L	E	I	R	D	C	P	F	G	D	K	A
Template Known Secondary structure		T	T								S	S														T	T								S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T								S		S		B
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.															470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	R	V	D	S	S	P	S	K	A	M	T	I	S	I	Y	R	N	K	I	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	N	A	S	K	L	E	T	M	R	S	L	W	M	S	S	C	S	V	S
Template Known Secondary structure					T	S	G	G	G	G	G	S	S						S	S	B		B
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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