Job Description P76321 Confidence 99.61% Date Thu Jan 5 12:21:47 GMT 2012 Rank 14 Aligned Residues 132 % Identity 17% Template c2o6rA_ PDB info PDB header:immune system Chain: A: PDB Molecule:variable lymphocyte receptor b; PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors b61 Resolution 2.30 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																		.																																																														.	.
Query SS confidence																		.																																																														.	.
Query Sequence		N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	.	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	S	S	P	.	.
Query Conservation																		.																																																														.	.
Alig confidence																		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	E	I	R	C	N	S	K	G	L	T	S	V	P	T	G	I	P	S	S	A	T	R	L	E	L	E	S	N	K	L	Q	S	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	V	F	D	K	L	T	Q	L	T	K	L	S	L	S	Q	N	Q	I	Q	S	L	P	D	G	V	F	D
Template Known Secondary structure		T	T						S	S			S	S			T	T			T	T		S						S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T		T	T		S						S	S							T	T	T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
				93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.																				.	.	.	.
Query SS confidence		.	.																				.	.	.	.
Query Sequence		.	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	.	.	.	.	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E	L	L	F	K	E	C	N	S	F	E	E
Query Conservation		.	.																				.	.	.	.
Alig confidence		.	.																				.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.
Template Sequence		K	L	T	K	L	T	I	L	Y	L	H	E	N	K	L	Q	S	L	P	N	G	V	F	D	K	L	T	Q	L	K	E	L	A	L	D	T	N	Q	L	K	S	V	P	D	G	.	.	.	.	.	.	.	.	I	F	D	R	L	T	S	L	Q	K	I	W	L	H	T	N	P	W	D	C	S	C	P	R	I	D	Y
Template Known Secondary structure		T		T	T								S	S							T	T	T	T	T	T		T	T								S	S			S				T	T	.	.	.	.	.	.	.	.	T	T	T	T		T	T								S	S		B
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		167	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	R	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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