Job Description P76321 Confidence 99.07% Date Thu Jan 5 12:21:47 GMT 2012 Rank 45 Aligned Residues 115 % Identity 17% Template c2je0E_ PDB info PDB header:nuclear protein Chain: E: PDB Molecule:acidic leucine-rich nuclear phosphoprotein 32 family PDBTitle: crystal structure of pp32 Resolution 2.40 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	S	S	P	.	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A
Query Conservation																																																														.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	D	V	K	E	L	V	L	D	N	S	R	S	N	E	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	G	L	T	D	E	F	E	E	L	E	F	L	S	T	I	N	V	G	L	T	S	I	A	N	L	P	K	L	N	K	L	K	K	L	E	L	S	D	N	R	V	S	G	G	L	E
Template Known Secondary structure		G	G	G		S					T	T		B		B	T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S			T	T		T	T							T	T	S						T	T					T	T								S	S				S		T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.															.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		111	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		M	P	.	.	.	.	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I	E	V	V	S	A	I	Y	S	N	K	E	L	L	F	K	E	C	N	S	F	E	E	T	F
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		V	L	A	E	K	C	P	N	L	T	H	L	N	L	S	G	N	K	I	K	D	L	S	T	I	E	.	.	.	.	.	.	.	P	L	K	K	L	E	N	L	K	S	L	D	L	F	N	C	E	V	T	N	L	N	D	Y	R	E	N	V	F
Template Known Secondary structure								T	T							T	T	S				S					G	.	.	.	.	.	.	.	G	G	G	G		T	T							T	T		G	G	G	G	S	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions