Job Description P76321 Confidence 98.80% Date Thu Jan 5 12:21:47 GMT 2012 Rank 59 Aligned Residues 104 % Identity 14% Template c2ifgB_ PDB info PDB header:transferase Chain: B: PDB Molecule:high affinity nerve growth factor receptor; PDBTitle: structure of the extracellular segment of human trka in complex with2 nerve growth factor Resolution 3.40 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.														.
Query SS confidence																						.	.														.
Query Sequence		C	V	E	L	H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	.	.	P	L	P	S	W	I	E	V	L	Y	L	R	H	.	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R
Query Conservation																						.	.														.
Alig confidence																						.	.														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	P	H	G	S	S	G	L	R	C	T	R	D	G	A	L	D	S	L	H	H	L	P	G	A	E	N	L	T	E	L	Y	I	E	N	Q	Q	H	L	Q	H	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	D	L	R	G	L	G	E	L	R	N	L	T	I	V	K	S	G	L	R	F
Template Known Secondary structure				S	S	S	S						S	S				T	T	T	T	T	S		S		S			S								S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G		S					S						S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.																.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		88	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																				.	.	.	.
Query SS confidence							.	.	.	.																				.	.	.	.
Query Sequence		V	D	S	S	P	.	.	.	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	.	.	.	.	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q
Query Conservation							.	.	.	.																				.	.	.	.
Alig confidence							.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		V	A	P	D	A	F	H	F	T	P	R	L	S	R	L	N	L	S	F	N	A	L	E	S	L	S	W	K	T	V	Q	G	L	S	L	Q	E	L	V	L	S	G	N	P	L	H	C	S	C	A
Template Known Secondary structure				T	T	G	G	G	S		S									S	S			S				G	G	G	T	S	S										S	S						G	G
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions