Job Description P76321 Confidence 82.79% Date Thu Jan 5 12:21:47 GMT 2012 Rank 81 Aligned Residues 98 % Identity 9% Template c1pgvA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:tropomodulin tmd-1; PDBTitle: structural genomics of caenorhabditis elegans: tropomodulin2 c-terminal domain Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																									.								.	.	.	.	.	.	.	.
Query SS confidence																									.								.	.	.	.	.	.	.	.
Query Sequence		M	D	I	A	L	V	R	L	F	K	C	V	E	L	H	N	S	K	L	D	L	T	D	.	L	H	L	G	S	L	P	.	.	.	.	.	.	.	.	P	L	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	K	V
Query Conservation																									.								.	.	.	.	.	.	.	.
Alig confidence												.													.								.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	S	C	I	N	R	L	R	E	.	D	D	T	D	L	K	E	V	N	I	N	N	M	K	R	V	S	K	E	R	I	R	S	L	I	E	A	A	C	N	S	K	H	I	E	K	F	S	L	A	N	T	A	I	S	D	S	E	A	R	G	L	I	E	L	I	E	.	.	.	.	.	.	.	.	.	.	.	T
Template Known Secondary structure											T	.	T		S	S							T	T			S	S													T	T		S								T	T	S			B					T	T							.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290												.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	.	.	.	.	.	.	.	.	S	S	P	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	S	L	R	V	L	N	V	E	S	N	F	L	T	P	E	L	L	A	R	L	L	R	S	T	L	V	T	Q	S	I	V	E	F	K	A	D	N	Q	R	Q	S	V	L	G	N
Template Known Secondary structure			S	S								S	S	B													T	T	T	T				S								S	S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions