 |
Job Description | P0AGJ5 | Confidence | 89.64% | Date | Thu Jan 5 11:29:19 GMT 2012 |
Rank | 49 | Aligned Residues | 103 |
% Identity | 23% | Template | d2qmma1 |
SCOP info | alpha/beta knot
| alpha/beta knot
| AF1056-like
|
Resolution | 1.85 |
|
 |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | H | N | L | G | G | M | M | R | S | C | A | H | F | G | V | K | . |
. |
. |
. |
. |
. |
. |
. |
G | V | V | V | Q | D | A | A | L | L | E | S | G | A | A | I | R | T | A | E | G | G | A | E | H | V | Q | P | I | T | G | D | N | I | V | N | V | L | D | D | F | R | Q | A | G | Y | T | V | V | T | T | S | S | E |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   | . | . | . | . | . | . | . | . |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |
| . |   |   |   |   |   |
|   |   |
|   |
|
|
Template Sequence |   |
D | E | R | N | V | A | G | H | I | K | K | A | L | A | V | E | C | G | K | S | W | K | K | V | H | S | G | V | Y | V | S | R | K | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | E | E | L | I | E | E | L | . |
S | E | K | Y | S | I | I | Y | L | K | E | D |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| S | S |
|  |  |  |  | T | T |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 210 | . | . | |
. | . | . | . | . | . | . | 220 | . | . | . | . |
  |
  |   |
279 | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | |
|
|
|
. | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | K | P | L | F | K | T | S | L | P | A | K | M | V | L | V | L | G | Q | E | Y | E | G | L | P | D | A | A | . |
. |
. |
. |
R | D | P | N | D | L | R | V | K | I | D | G | T | G | N | V | A | G | L | N | I | S | V | A | T | G | V | L | L | G | E | W | W | R |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |   | . | . | . | . |   |   |   |   |
|   |   |
|   |
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
| . |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
| . |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
| . | . | . | . |
|
|   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |
|
|
|
Template Sequence |   |
G | . |
V | D | I | S | N | A | Q | L | P | P | N | P | L | F | V | I | G | D | . |
H | E | G | L | T | E | E | Q | E | K | V | V | E | R | Y | A | A | L | K | L | S | L | . |
. |
. |
. |
S | P | L | S | L | L | A | E | Q | C | V | V | I | A | H | H | H | L | D | R |
Template Known Secondary structure |   |
 | . |  |  | G | G | G | S |
|
|
| S | S |  |  |  |  |  |  |
| . | T | T |
|
|
|  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| . | . | . | . |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | |
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | |
. | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | |
|
|
|
. | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|