Job Description P0AGJ5 Confidence 62.80% Date Thu Jan 5 11:29:19 GMT 2012 Rank 76 Aligned Residues 159 % Identity 11% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.															.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	N	A	C	Q	A	L	F	Q	S	R	P	E	A	I	V	R	A	W	F	I	Q	S	V	.	.	T	P	R	F	K	E	A	L	R	W	M	A	A	N	R	K	A	Y	H	V	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	L	T	K	A	S	G	T	E	H	H	G	G	V	C	F
Query Conservation																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	A	L	F	Q	R	L	S	A	A	Q	Q	G	A	F	V	P	F	V	T	I	G	D	P	N	P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C	F	E
Template Known Secondary structure													T	B									T	T	S	S															T	T		S	S										T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																													.																												.
Query SS confidence																													.																												.
Query Sequence		L	I	K	K	R	N	G	T	T	V	Q	Q	W	V	S	Q	A	G	A	Q	D	C	V	L	A	L	E	.	N	E	S	N	P	H	N	L	G	G	M	M	R	S	C	A	H	F	G	V	K	G	V	V	V	Q	D	.	A	A	L	L	E	S	G	A	A	I	R	T	A	E	G	G	A	E	H	V	Q	P	I	T
Query Conservation																													.																												.
Alig confidence		.	.	.	.	.	.	.	.																				.																												.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	I	A	Q	I	R	A	R	N	P	E	T	P	I	G	L	L	M	Y	A	N	L	V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	A	D	V	P	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P
Template Known Secondary structure		.	.	.	.	.	.	.	.										T	T	S													T	T													T							T	T	S		G	G	G											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		G	D	N	I	V	N	V	L	D	D	F	R	Q	.	A	G	Y	T	V	V	T	T	S	S	E	Q
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		P	T	A	S	D	E	T	L	R	A	V	A	Q	L	G	K	G	Y	T	Y	L	L	S	R	A	P
Template Known Secondary structure		T	T			S												S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions