Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGJ5
Confidence64.66%DateThu Jan 5 11:29:19 GMT 2012
Rank74Aligned Residues56
% Identity20%Templatec3mcaB_
PDB info PDB header:translation regulation/hydrolaseChain: B: PDB Molecule:protein dom34; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay
Resolution2.74 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130...... ...140.........150......... 160.......
Predicted Secondary structure 







........





.....
Query SS confidence 


























. . . . . . . .






















. . . . .







Query Sequence  VYGENACQALFQSRPEAIVRAWFIQSV. . . . . . . . TPRFKEALRWMAANRKAYHVVDE. . . . . AELTKASG
Query Conservation 


  

 


         
      ........  
   

  
    
 
  
  .....  
   
 
Alig confidence 













..










........






















.....







Template Conservation   

  

  


 
..

 





 
 
  
   
     


     
  
 


   
 
 

  


Template Sequence  WYGPNHVLKAFELG. . AIGELLISDSLFRSSDIATRKKWVSLVEGVKEINCPVYIFSSLHESGKQLDLLSG
Template Known Secondary structure  STT..
BSS
TT


S
TT


TTSTTS
Template Predicted Secondary structure 


..





















Template SS confidence 






































































   293......300...... ...310.........320.........330.........340.........350.........360.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions