Job Description P0AGJ5 Confidence 95.22% Date Thu Jan 5 11:29:19 GMT 2012 Rank 29 Aligned Residues 81 % Identity 6% Template c3cpqB_ PDB info PDB header:ribosomal protein Chain: B: PDB Molecule:50s ribosomal protein l30e; PDBTitle: crystal structure of l30e a ribosomal protein from2 methanocaldococcus jannaschii dsm2661 (mj1044) Resolution 1.90 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																.																				.	.
Query SS confidence																																.																				.	.
Query Sequence		R	V	Y	G	E	N	A	C	Q	A	L	F	Q	S	R	P	E	A	I	V	R	A	W	F	I	Q	S	V	T	P	.	R	F	K	E	A	L	R	W	M	A	A	N	R	K	A	Y	H	V	V	.	.	D	E	A	E	L	T	K	A	S	G	T	E	H	H	G	G	V	C	F	L	I	K	K	R	N	G	T	T
Query Conservation																																.																				.	.
Alig confidence																	.	.														.																				.	.																											.
Template Conservation																	.	.																																																														.
Template Sequence		V	I	L	G	S	K	R	T	I	K	F	V	K	H	G	.	.	E	G	K	L	V	V	L	A	G	N	I	P	K	D	L	E	E	D	V	K	Y	Y	A	K	L	S	N	I	P	V	Y	Q	H	K	I	T	S	L	E	L	G	A	V	C	G	K	P	F	P	V	A	A	L	L	V	L	D	E	G	L	S	.	N
Template Known Secondary structure					S										T	T	.	.			S						T	T																T	T								S									T	T		S	S			S								T	T		.
Template Predicted Secondary structure																	.	.																																																														.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.
		186	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Q	W	V	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	E	L	V	E	K
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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