Job Description P0AGJ5 Confidence 89.38% Date Thu Jan 5 11:29:19 GMT 2012 Rank 50 Aligned Residues 95 % Identity 11% Template c2zkrf_ PDB info PDB header:ribosomal protein/rna Chain: F: PDB Molecule:rna expansion segment es7 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.
Predicted Secondary structure																																																												.																				.
Query SS confidence																																																												.																				.
Query Sequence		L	R	R	Q	R	A	E	E	T	R	V	Y	G	E	N	A	C	Q	A	L	F	Q	S	R	P	E	A	I	V	R	A	W	F	I	Q	S	V	T	P	R	F	K	E	A	L	R	W	M	A	A	N	R	K	A	Y	H	V	V	.	D	E	A	E	L	T	K	A	S	G	T	E	H	H	G	G	V	C	F	.	L
Query Conservation																																																												.																				.
Alig confidence																																																												.																				.
Template Conservation
Template Sequence		D	V	P	T	K	R	P	P	V	L	R	A	G	V	N	T	V	T	T	L	V	E	N	K	K	A	Q	L	V	V	I	A	H	D	V	D	P	I	E	L	V	V	F	L	P	A	L	C	R	K	M	G	V	P	Y	C	I	I	K	G	K	A	R	L	G	H	L	V	H	R	K	T	C	T	T	V	A	F	T	Q
Template Known Secondary structure				S	S	S	S						B	S										T	T			S						S			S	S	S	T	T	T	T										T							S										T	S	S			S					T	T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	K	R	N	G	T	T	V	Q	Q	W	V	S	Q	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	S	E	D	K	G	A	L	A	K	L	V	E	A	I	R
Template Known Secondary structure			S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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