Job Description P0AGJ5 Confidence 94.60% Date Thu Jan 5 11:29:19 GMT 2012 Rank 33 Aligned Residues 70 % Identity 14% Template c2zkr6_ PDB info PDB header:ribosomal protein/rna Chain: 6: PDB Molecule:60s ribosomal protein l30e; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																.																				.	.
Query SS confidence																																.																				.	.
Query Sequence		R	V	Y	G	E	N	A	C	Q	A	L	F	Q	S	R	P	E	A	I	V	R	A	W	F	I	Q	S	V	T	P	.	R	F	K	E	A	L	R	W	M	A	A	N	R	K	A	Y	H	V	V	.	.	D	E	A	E	L	T	K	A	S	G	T	E	H	H	G	G	V	C	F	L	I	K	K
Query Conservation																																.																				.	.
Alig confidence																	.	.														.																				.	.
Template Conservation																	.	.
Template Sequence		Y	V	L	G	Y	K	Q	T	L	K	M	I	R	Q	G	.	.	K	A	K	L	V	I	L	A	N	N	C	P	A	L	R	K	S	E	I	E	Y	Y	A	M	L	A	K	T	G	V	H	H	Y	S	G	N	N	I	E	L	G	T	A	C	G	K	Y	Y	R	V	C	T	L	A	I	I	D	P
Template Known Secondary structure					S											T	.	.									T	T			S	S	T	T	T										T								S										T		S	S			S						S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions