Job Description P0AGJ5 Confidence 97.05% Date Thu Jan 5 11:29:19 GMT 2012 Rank 22 Aligned Residues 115 % Identity 15% Template c2yy8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0106 protein ph0461; PDBTitle: crystal structure of archaeal trna-methylase for position2 56 (atrm56) from pyrococcus horikoshii, complexed with s-3 adenosyl-l-methionine Resolution 2.48 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.								280	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																																														.	.	.	.	.	.	.
Query SS confidence																				.																																														.	.	.	.	.	.	.
Query Sequence		S	C	A	H	F	G	V	K	G	V	V	V	Q	D	A	A	L	L	.	E	S	G	A	A	I	R	T	A	E	G	G	A	E	H	V	Q	P	I	T	G	D	N	I	V	N	V	L	D	D	F	R	Q	A	G	Y	T	V	V	T	T	S	S	E	Q	.	.	.	.	.	.	.	G	K	P	L	F	K	T	S	L
Query Conservation																				.																																														.	.	.	.	.	.	.
Alig confidence																				.																												.	.	.																.	.	.	.	.	.	.
Template Conservation																																																.	.	.
Template Sequence		T	A	R	A	F	G	A	D	G	I	I	I	A	S	E	E	D	E	K	V	K	E	S	V	E	D	V	V	K	R	W	G	G	P	F	F	I	E	F	N	R	N	W	R	K	V	.	.	.	M	K	E	F	T	G	V	K	V	H	L	T	M	Y	G	L	H	V	D	D	V	I	E	E	L	K	E	K	L	K	K
Template Known Secondary structure						T	T		S					S	S	S																		S								S						.	.	.						S												G	G	G	T										T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	K	M	V	L	V	L	G	Q	E	Y	E	G	L	P	D	A	A	R	D	P	N	D	L	R	V	K	I	D	G	T	G	N	V	A	G	L	N	I	S	V	A	T	G	V	L	L	G	E	W	W
Query Conservation
Alig confidence														.	.																								.	.	.	.
Template Conservation														.	.																								.	.	.	.
Template Sequence		G	E	D	F	M	I	I	V	G	A	E	K	.	.	V	P	R	E	V	Y	E	L	A	D	Y	N	V	A	I	G	N	Q	P	H	S	E	V	.	.	.	.	A	A	L	A	V	L	L	D	R	L	L
Template Known Secondary structure		T									S	S		.	.										S					S	S	S	S						.	.	.	.
Template Predicted Secondary structure														.	.																								.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions