Job Description P0AGJ5 Confidence 87.72% Date Thu Jan 5 11:29:19 GMT 2012 Rank 54 Aligned Residues 73 % Identity 16% Template c2vgmA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:dom34; PDBTitle: structure of yeast dom34 : a protein related to translation2 termination factor erf1 and involved in no-go decay. Resolution 2.6 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.																											.	.
Query SS confidence																													.	.	.	.	.	.	.	.																											.	.
Query Sequence		V	Y	G	E	N	A	C	Q	A	L	F	Q	S	R	P	E	A	I	V	R	A	W	F	I	Q	S	V	.	.	.	.	.	.	.	.	T	P	R	F	K	E	A	L	R	W	M	A	A	N	R	K	A	Y	H	V	V	D	E	A	E	L	.	.	T	K	A	S	G	T	E	H	H	G	G	V	C	F	L	I	K
Query Conservation																													.	.	.	.	.	.	.	.																											.	.
Alig confidence																.	.												.	.	.	.	.	.	.	.																											.	.							.	.	.						.
Template Conservation																.	.																																																						.	.	.						.
Template Sequence		W	Y	G	E	K	E	V	V	K	A	A	E	Y	G	.	.	A	I	S	Y	L	L	L	T	D	K	V	L	H	S	D	N	I	A	Q	R	E	E	Y	L	K	L	M	D	S	V	E	S	N	G	G	K	A	L	V	L	S	T	L	H	S	L	G	E	E	L	D	Q	L	.	.	.	T	G	I	A	C	.	I	L
Template Known Secondary structure				S										T	T	.	.													T		S		T	T														T	T	T								T	T	S								T	T	.	.	.	T	S				.
Template Predicted Secondary structure																.	.																																																						.	.	.						.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.	370		.	.
		180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	N	G	T	T	V	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	P	L	P	D	L	D	E
Template Known Secondary structure		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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