Job Description P0AGJ5 Confidence 79.84% Date Thu Jan 5 11:29:19 GMT 2012 Rank 63 Aligned Residues 68 % Identity 10% Template c2ktvA_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor subunit 1; PDBTitle: human erf1 c-domain, "open" conformer Resolution UNK

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																																														.	.	.	.	140	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	G	E	N	A	C	Q	A	L	F	Q	S	R	P	E	A	I	V	R	A	W	F	I	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	P	R	F	K	E	A	L
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		C	F	G	V	E	D	T	L	K	A	L	E	M	G	.	.	A	V	E	I	L	I	V	Y	E	N	L	D	I	M	R	Y	V	L	H	C	Q	G	T	E	E	E	K	I	L	Y	L	T	P	E	Q	E	K	D	K	S	H	F	T	D	K	E	T	G	Q	E	H	E	L	I	E	S	M	P	L	L	E	W	F	A
Template Known Secondary structure				S											T	.	.									T	T											T	T		S																T	T	T	S		T	T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	M	A	A	N	R	K	A	Y	H	V	V	D	E	A	E	L	T	K	A	S	G	T	E	H	H	G	G	V	C	F	L	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	Y	K	K	F	G	A	T	L	E	I	V	T	D	K	S	Q	E	G	S	Q	F	V	K	G	F	G	G	I	G	G	I	L	R
Template Known Secondary structure								T								T	T	S								T	T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions