Job Description P0AGJ5 Confidence 30.78% Date Thu Jan 5 11:29:19 GMT 2012 Rank 105 Aligned Residues 159 % Identity 11% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.															.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	N	A	C	Q	A	L	F	Q	S	R	P	E	A	I	V	R	A	W	F	I	Q	S	V	.	.	T	P	R	F	K	E	A	L	R	W	M	A	A	N	R	K	A	Y	H	V	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	L	T	K	A	S	G	T	E	H	H	G	G	V	C	F
Query Conservation																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	D	K	F	T	E	L	K	E	K	R	E	K	A	L	V	S	Y	L	M	V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E
Template Known Secondary structure													T	B									T	T	S	S															T	T		S									S			T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																												.																													.
Query SS confidence																												.																													.
Query Sequence		L	I	K	K	R	N	G	T	T	V	Q	Q	W	V	S	Q	A	G	A	Q	D	C	V	L	A	L	.	E	N	E	S	N	P	H	N	L	G	G	M	M	R	S	C	A	H	F	G	V	K	G	V	V	V	Q	D	.	A	A	L	L	E	S	G	A	A	I	R	T	A	E	G	G	A	E	H	V	Q	P	I	T
Query Conservation																												.																													.
Alig confidence		.	.	.	.	.	.	.	.																			.																													.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A
Template Known Secondary structure		.	.	.	.	.	.	.	.										T	T	S																										T	T							T	T																T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		G	D	N	I	V	N	V	L	D	D	F	R	Q	A	G	.	Y	T	V	V	T	T	S	S	E	Q
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		P	T	S	T	R	K	R	I	K	L	I	C	E	A	A	D	E	M	T	Y	F	V	S	V	T	G
Template Known Secondary structure		T	T														S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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