Job Description P0AGJ5 Confidence 85.70% Date Thu Jan 5 11:29:19 GMT 2012 Rank 57 Aligned Residues 148 % Identity 16% Template c2egwB_ PDB info PDB header:rna methyltransferase Chain: B: PDB Molecule:upf0088 protein aq_165; PDBTitle: crystal structure of rrna methyltransferase with sah ligand Resolution 2.80 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.											.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.								.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	G	A	Q	D	C	V	L	A	L	E	N	E	S	N	P	H	N	L	G	G	M	M	R	S	C	A	H	F	G	V	K	G	V	V	V	.	.	Q	D	A	A	L	L	E	.	.	.	.	.	.	.	.	.	.	S	G	A	A	I	R	T	A	E	G	G	A	E	H	V	Q	P	I	T	G	D	N	I	V
Query Conservation																																							.	.								.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	P	P	K	D	I	T	L	Y	Q	S	V	T	V	D	L	K	T	M	D	T	I	V	R	Q	A	T	E	L	G	V	L	T	F	V	P	I	I	S	E	R	S	F	Q	K	E	E	A	I	L	K	K	T	E	K	W	K	R	I	V	I	E	A	M	K	Q	S	R	R	P	I	P	M	E	I	K	K	P	V
Template Known Secondary structure					S	S										S	S	T													T	T										T	T	S																									T	T			S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		N	V	L	D	D	F	R	Q	A	G	Y	T	V	V	T	T	S	S	E	Q	G	K	P	L	F	K	T	S	L	P	A	K	M	V	.	L	V	L	G	Q	E	Y	E	G	L	P	D	A	A	R	D	P	N	D	L	R	V	K	I	D	G	T	G	N	V	A	G	L	N	I	S	V	A	T	G	V	L	L	G	E
Query Conservation																																				.
Alig confidence																																				.								.
Template Conservation																																												.
Template Sequence		R	L	S	D	L	I	P	E	S	E	E	N	I	I	L	D	N	F	Y	E	G	V	K	P	K	D	V	N	L	E	A	K	T	Y	S	V	V	V	G	P	E	G	.	G	F	S	K	R	E	S	Q	I	L	R	E	K	G	F	K	S	V	L	L	E	P	Y	T	L	R	T	E	T	A	V	V	S	I	V	S	I
Template Known Secondary structure			G	G	G					S	S							S	S	S			B		G	G	G	S		T	T		S									T	T	.													T	T							S	S	S
Template Predicted Secondary structure																																												.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		339	340
Predicted Secondary structure
Query SS confidence
Query Sequence		W	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		226	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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