Job Description P0AGJ5 Confidence 38.90% Date Thu Jan 5 11:29:19 GMT 2012 Rank 95 Aligned Residues 72 % Identity 14% Template c1s1iG_ PDB info PDB header:ribosome Chain: G: PDB Molecule:60s ribosomal protein l8-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. Resolution 11.70 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		L	R	R	Q	R	A	E	E	T	R	V	Y	G	E	N	A	C	Q	A	L	F	Q	S	R	P	E	A	I	V	R	A	W	F	I	Q	S	V	T	P	R	F	K	E	A	L	R	W	M	A	A	N	R	K	A	Y	H	V	V	.	D	E	A	E	L	T	K	A	S	G	T	E	H	H
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		Q	D	A	S	P	K	P	Y	A	V	K	Y	G	L	N	H	V	V	A	L	I	E	N	K	K	A	K	L	V	L	I	A	N	D	V	D	P	I	E	L	V	V	F	L	P	A	L	C	K	K	M	G	V	P	Y	A	I	V	K	G	K	A	R	L	G	T	L	V	N	Q	K	T	S
Template Known Secondary structure		T	T	T	T	T	S	S	S					S										T	T			S						S	S			S			S	T	T	S	S	S	S	S	S	T	T	T	T							S		T	T					S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions