Job Description P0AGJ5 Confidence 100.00% Date Thu Jan 5 11:29:19 GMT 2012 Rank 2 Aligned Residues 235 % Identity 23% Template c1ipaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rna 2'-o-ribose methyltransferase; PDBTitle: crystal structure of rna 2'-o ribose methyltransferase Resolution 2.40 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	R	A	E	E	T	R	V	Y	G	E	N	A	C	Q	A	L	F	Q	S	R	P	E	A	I	V	R	A	W	F	I	Q	S	V	T	P	R	F	K	E	A	L	R	W	M	A	A	N	R	K	A	Y	H	V	V	D	E	A	E	L	T	K	A	S	G	T	E	H	H	G	G	V	C	F	L	I	K	K	R
Query Conservation
Alig confidence																								.															.	.	.
Template Conservation																								.															.	.	.
Template Sequence		R	D	S	Q	R	R	F	L	I	E	G	A	R	E	I	E	R	A	L	Q	A	G	.	I	E	L	E	Q	A	L	V	W	E	G	G	L	N	.	.	.	P	E	E	Q	Q	V	Y	A	A	L	L	A	L	L	E	V	S	E	A	V	L	K	K	L	S	V	R	D	N	P	A	G	L	I	A	L	A	R	M	P
Template Known Secondary structure						T						S										T	T	.										T	T				.	.	.																											S	S	S			S
Template Predicted Secondary structure																								.															.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	T	T	V	Q	Q	W	V	S	Q	A	G	A	Q	D	C	V	L	A	L	E	N	E	S	N	P	H	N	L	G	G	M	M	R	S	C	A	H	F	G	V	K	G	V	V	V	Q	D	A	A	L	L	E	S	G	A	A	I	R	T	A	E	G	G	A	E	H	V	Q	P	I	T	G	D	N	I	V	N	V
Query Conservation
Alig confidence								.	.	.																																																																		.
Template Conservation								.	.	.																																																																		.
Template Sequence		E	R	T	L	E	E	.	.	.	Y	R	P	S	P	D	A	L	I	L	V	A	V	G	L	E	K	P	G	N	L	G	A	V	L	R	S	A	D	A	A	G	A	E	A	V	L	V	A	G	G	V	D	L	Y	S	P	Q	V	I	R	N	S	T	G	V	V	F	S	L	R	T	L	A	A	.	S	E	S	E	V
Template Known Secondary structure								.	.	.					T	T								S																		T		S						S				T	T								T	T	T	G	G	G	T	S						.
Template Predicted Secondary structure								.	.	.																																																																		.
Template SS confidence
		104	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	D	F	R	Q	A	G	Y	T	V	V	T	T	S	S	E	Q	G	K	P	L	F	K	T	S	L	P	A	K	M	V	L	V	L	G	Q	E	Y	E	G	L	P	D	A	A	R	D	P	N	D	L	R	V	K	I	D	G	T	G	N	V	A	G	L	N	I	S	V	A	T	G	V	L	L	G	E	W	W	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	W	I	K	Q	H	N	L	P	L	V	A	T	T	P	H	A	E	A	L	Y	W	E	A	N	L	R	P	P	V	A	I	A	V	G	P	E	H	E	G	L	R	A	A	W	L	E	A	A	Q	T	Q	V	R	I	P	M	Q	G	Q	A	D	S	L	N	V	S	V	S	A	A	L	L	L	Y	E	A	L	R
Template Known Secondary structure								T	T								T	T		S	S	B	G	G	G	S				S	S								T	T	S											S				B					S	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		342	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	L
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		260	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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