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Job Description | P68206 | Confidence | 5.09% | Date | Thu Jan 5 12:11:00 GMT 2012 |
Rank | 7 | Aligned Residues | 45 |
% Identity | 24% | Template | c3pltB_ |
PDB info |
PDB header:structural protein | Chain: B: PDB Molecule:sphingolipid long chain base-responsive protein lsp1; |
PDBTitle: crystal structure of lsp1 from saccharomyces cerevisiae
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Resolution | 2.90 Å |
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20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | W | G | K | L | T | D | D | D | M | T | I | I | E | G | K | R | D | Q | L | . |
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V | G | K | I | Q | E | R | Y | G | Y | Q | K | D | Q | A | E | K | E | V | V | D | W | E | T | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | W | G | A | D | N | D | D | D | V | S | D | V | T | D | K | L | G | V | L | I | Y | E | L | G | E | L | Q | D | Q | F | I | D | K | Y | D | Q | Y | R | V | T | L | K | S | I | R | N | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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