Job Description P0AC30 Confidence 15.66% Date Thu Jan 5 11:17:02 GMT 2012 Rank 64 Aligned Residues 78 % Identity 9% Template c3gr0D_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:protein prgh; PDBTitle: periplasmic domain of the t3ss inner membrane protein prgh from2 s.typhimurium (fragment 170-362) Resolution 2.30 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																										.	.			.	.
Query SS confidence																																										.	.			.	.
Query Sequence		D	D	D	A	A	A	G	V	V	A	Q	L	Q	A	E	Q	G	V	E	K	V	N	Y	L	S	R	E	D	A	L	G	E	F	R	N	W	S	G	F	G	.	.	G	A	.	.	L	D	M	L	E	E	N	P	L	P	A	V	A	V	V	I	P	K	L	D	F	Q	G	T	E	S	L	N	T	L	R	D	R	I
Query Conservation																																										.	.			.	.
Alig confidence																																										.	.			.	.
Template Conservation
Template Sequence		N	E	R	D	T	L	W	A	R	Q	V	L	A	R	G	D	Y	D	K	N	A	R	V	I	N	E	N	E	E	N	K	R	I	S	I	W	L	D	T	Y	Y	P	Q	L	A	Y	Y	R	I	H	F	D	E	P	R	K	P	V	F	W	L	S	R	Q	R	N	T	M	S	K	K	E	L	E	V	L	S	Q	K	L
Template Known Secondary structure		S													T	T	T		T	T	T																					S	T	T									S	S	T	T	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		196	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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