Job Description P0AC30 Confidence 30.84% Date Thu Jan 5 11:17:02 GMT 2012 Rank 22 Aligned Residues 71 % Identity 11% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	P	Q	I	T	V	Y	L	Q	K	T	L	D	D	D	A	A	A	G	V	V	A	Q	L	Q	A	E	Q	G	V	E	K	V	N	Y	L	S	R	E	D	A	L	G	E	F	R	N	W	S	G	F	G	G	A	L	D	M	L	E	E	N	P	L	P	A	V	A	V	V	I	P	K	L	D	F	Q	G	T	E
Query Conservation
Alig confidence																																		.																			.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation																																		.																			.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Template Sequence		E	E	G	K	L	V	I	W	I	N	G	D	K	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	D	T	G	I	K	.	V	T	V	E	H	P	D	K	L	E	E	K	F	P	Q	V	A	A	.	.	.	.	.	.	.	.	.	T	G	D	G	P	D	I	I	F	W	.	.	.	.	.	.	.	A	H	D
Template Known Secondary structure			T	T	S							T	T	S		S															S			.							T	T											.	.	.	.	.	.	.	.	.	S	S		S		S					.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.																			.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.		.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.										.	.	.	.	.	.	1060	.	.	.								.	.	.
		187	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	T	L	R	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	G	G	Y	A	Q	S
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		1067	.	.	1070	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions