Job Description P0AC30 Confidence 90.08% Date Thu Jan 5 11:17:02 GMT 2012 Rank 2 Aligned Residues 128 % Identity 17% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	M	V	I	A	I	S	L	T	L	P	S	V	C	Y	M	V	Y	K	N	V	N	Q	A	A	T	Q	Y	Y	P	S	P	Q	I	T	V	Y	L	Q	K	T	L	D	D	D	A	A	.	.	.	.	.	A	G	V	V	A	Q	L	Q	A	E	Q	G	V	E	K	V	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.											.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		F	A	W	V	I	A	I	I	I	M	L	A	G	G	L	A	I	L	K	L	P	V	A	Q	Y	P	T	I	A	P	P	A	V	T	I	S	A	.	S	Y	P	G	A	D	A	K	T	V	Q	D	T	V	T	Q	V	I	E	Q	N	M	N	G	I	D	N	L	M	Y	M	S	S	N	S	D	S	T	G	T	V	Q
Template Known Secondary structure																			T	T	S				S	S				S									.			T	T										T							T					S	S										T	T	S
Template Predicted Secondary structure																																							.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
								141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																			.														.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																			.														.	.	.	.	.
Query Sequence		.	.	.	.	.	.	N	Y	L	S	R	E	D	A	L	G	E	F	R	N	W	S	G	.	.	.	.	.	.	.	.	.	.	F	G	G	A	L	D	M	L	E	E	N	P	L	P	A	V	A	V	.	V	I	P	K	L	D	F	Q	G	T	E	S	L	.	.	.	.	.	N	T	L	R	D	R	I	T	Q	I
Query Conservation		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																			.														.	.	.	.	.
Alig confidence		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																			.														.	.	.	.	.
Template Conservation
Template Sequence		I	T	L	T	F	E	S	G	T	D	A	D	I	A	Q	V	Q	V	Q	N	K	L	Q	L	A	M	P	L	L	P	Q	E	V	Q	Q	Q	G	V	S	V	E	K	S	S	S	S	F	L	M	V	V	G	V	I	N	T	D	G	T	M	T	Q	E	D	I	S	D	Y	V	A	A	N	M	K	D	A	I	S	R	T
Template Known Secondary structure								T	T															T	T	T	G	G	G	S						T	S																				S	S	S				T	T								T	T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	I	D	E	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	V	G	D	V	Q
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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