Return to main results Retrieve Phyre Job Id

Job DescriptionP75715
Confidence99.88%DateThu Jan 5 12:13:24 GMT 2012
Rank3Aligned Residues128
% Identity17%Templated1n12a_
SCOP infoCommon fold of diphtheria toxin/transcription factors/cytochrome f Bacterial adhesins Pilus subunits
Resolution1.87

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220.........230.........240........ .250.........260....
Predicted Secondary structure 
































....














Query SS confidence 



























































. . . .















Query Sequence  QNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAYLTMRLE. . . . ASAVSGQAMVSDNQDL
Query Conservation    
 

 
  
 
 

 
    
   
                           
     ....               
Alig confidence 






...

















.......
























....















Template Conservation 





 ...
 



 
          .......  
     
 
                         

 

  

Template Sequence  PACTVSN. . . TTVDWQDVEIQTLSQNGN. . . . . . . HEKEFTVNXRCPYNLGTXKVTITATNTYNNAILVQNTSNTSSDGL
Template Known Secondary structure 




...








GGG

TT
.......
S


S

SSTT
TT
BSSTT
Template Predicted Secondary structure 



...








.......
























Template SS confidence 















































































   13...... 20.........30....... ..40.........50.........60.........70.........80..
 
   265....270... ......280.........290.........300.........310.........320......
Predicted Secondary structure 



....

























Query SS confidence 








. . . .




















































Query Sequence  GFIVADQND. . . . TPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDY
Query Conservation 

 
 
  
....  
  
                   
 
 

   
     
 
 
 


 
 
Alig confidence 








....




















































Template Conservation 

 
 
                                  




  
  
  
 
 




 
 
Template Sequence  LVYLYNSNAGNIGTAITLGTPFTPGKITGNNADKTISLHAKLGYKGNXQNLIAGPFSATATLVASY
Template Known Secondary structure  TT

TTS
B

S

SSSS
GGGB

S





Template Predicted Secondary structure 









































Template SS confidence 

































































   83......90.........100.........110.........120.........130.........140........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions