Job Description P75715 Confidence 3.28% Date Thu Jan 5 12:13:24 GMT 2012 Rank 25 Aligned Residues 119 % Identity 17% Template c2qqpG_ PDB info PDB header:virus Chain: G: PDB Molecule:large capsid protein; PDBTitle: crystal structure of authentic providence virus Resolution 3.80 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.
Predicted Secondary structure																																																												.	.	.													.	.
Query SS confidence																																																												.	.	.													.	.
Query Sequence		N	C	E	L	N	A	G	Q	I	V	E	F	D	F	G	D	I	G	A	S	L	F	S	A	A	G	P	G	N	R	P	A	G	V	M	P	Q	T	K	S	I	A	V	K	C	T	N	V	A	A	Q	A	Y	L	T	M	R	L	.	.	.	E	A	S	A	V	S	G	Q	A	M	V	S	.	.	D	N	Q	D	L
Query Conservation																																																												.	.	.													.	.
Alig confidence												.	.											.	.	.	.	.	.	.	.	.	.																											.	.	.													.	.
Template Conservation												.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	E	F	N	A	P	T	L	I	.	.	D	Q	G	W	W	V	G	A	H	I	.	.	.	.	.	.	.	.	.	.	P	V	K	P	Q	S	E	T	I	P	A	A	E	R	F	S	A	G	S	M	T	V	S	A	S	N	A	I	F	Q	P	S	N	T	V	A	R	I	V	W	S	I	T	P	L	P	V	A
Template Known Secondary structure									S	S		.	.											.	.	.	.	.	.	.	.	.	.												B	S	S									B					T	T	S		T	T	S
Template Predicted Secondary structure												.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.											.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	I	V	A	D	Q	N	D	T	P	I	T	P	N	D	L	N	S	V	I	P	F	R	L	D	A	A	A	A	A	N	V	T	L	R	A	W	P	I	S	I	T	G	Q	K	P	T	E	G	P	F	S	A	L	G	Y	L	R	V	D	Y	Q
Query Conservation
Alig confidence												.	.																										.	.	.	.	.
Template Conservation												.	.																										.	.	.	.	.
Template Sequence		T	V	A	L	T	T	G	T	G	G	.	.	T	N	N	T	S	G	K	F	F	S	V	E	I	D	G	N	V	N	S	V	W	T	F	T	A	.	.	.	.	.	P	A	S	I	L	A	E	G	E	P	F	A	E	E	G	D	T	T	S	F	S
Template Known Secondary structure							B	S	S			.	.						S	S										T	T								.	.	.	.	.		S					T	T						S	S
Template Predicted Secondary structure												.	.																										.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.						.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions