Job Description Q9S4X4 Confidence 24.57% Date Thu Jan 5 12:38:28 GMT 2012 Rank 6 Aligned Residues 42 % Identity 24% Template c3it8E_ PDB info PDB header:immune system Chain: E: PDB Molecule:2l protein; PDBTitle: crystal structure of tnf alpha complexed with a poxvirus mhc-related2 tnf binding protein Resolution 2.80 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	G	P	C	G	Y	E	V	N	I	S	S	Q	G	D	N	F	I	Q	V	D	F	D	T	P	W	C	Q	P	E	S	D	V	I	A	V	L	S	R	R	F	S	C	T	L	E	H
Query Conservation
Alig confidence																																.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		E	P	G	E	P	G	F	P	W	N	I	K	K	D	K	D	A	N	T	Y	S	L	T	D	L	V	R	T	T	S	.	.	.	.	.	.	K	M	S	S	Q	P	V	C	V	V	F	H
Template Known Secondary structure			T	T	S	T	T	S								T	T	S	S												T	.	.	.	.	.	.	T		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.							.	.	.	.	.	.	280	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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