Job Description Q9S4X4 Confidence 10.38% Date Thu Jan 5 12:38:28 GMT 2012 Rank 76 Aligned Residues 46 % Identity 15% Template c3e6fB_ PDB info PDB header:immune system Chain: B: PDB Molecule:beta-2 microglobulin; PDBTitle: mhc class i h-2dd heavy chain complexed with beta-22 microglobulin and a variant peptide, pa9, from the human3 immunodeficiency virus (bal) envelope glycoprotein 120 Resolution 2.41 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.
Query Sequence		G	P	C	G	Y	E	V	N	I	S	S	Q	G	D	N	F	I	Q	V	D	F	D	T	P	W	C	Q	P	E	S	.	.	.	.	.	.	.	.	D	V	I	A	V	L	S	R	R	F	S	C	T	L	E	H
Query Conservation																																.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	P	P	H	I	E	I	Q	M	L	K	N	G	K	K	I	P	K	V	E	M	S	D	M	S	F	S	K	D	W	S	F	Y	I	L	A	H	T	E	F	T	P	T	E	T	D	T	Y	A	C	R	V	K	H
Template Known Secondary structure		B	S	S									T	T				S											T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions