Job Description Q9S4X4 Confidence 12.45% Date Thu Jan 5 12:38:28 GMT 2012 Rank 53 Aligned Residues 46 % Identity 17% Template c2q6wD_ PDB info PDB header:immune system Chain: D: PDB Molecule:hla class ii histocompatibility antigen, dr PDBTitle: the structure of hla-dra, drb3*0101 (dr52a) with bound2 platelet integrin peptide associated with fetal and3 neonatal alloimmune thrombocytopenia Resolution 2.25 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.
Query Sequence		G	P	C	G	Y	E	V	N	I	S	S	Q	G	D	N	F	I	Q	V	D	F	D	T	P	W	C	Q	P	E	S	.	.	.	.	.	.	.	.	.	D	V	I	A	V	L	S	R	R	F	S	C	T	L	E	H
Query Conservation																																.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	P	V	V	N	V	T	W	L	R	N	G	K	P	V	T	T	G	V	S	E	T	V	F	L	P	R	E	D	H	L	F	R	K	F	H	Y	L	P	F	L	P	S	T	E	D	V	Y	D	C	R	V	E	H
Template Known Secondary structure		B	S	S									T	T					T	T										T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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