Job Description P00936 Confidence 21.32% Date Thu Jan 5 10:57:15 GMT 2012 Rank 67 Aligned Residues 100 % Identity 13% Template c1w17A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase. Resolution 1.9 Å

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		182	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		L	L	D	E	F	Y	R	T	A	V	R	L	.	.	.	A	G	K	R	I	L	W	N	M	V	P	C	D	E	E	E	H	Y	D	D	Y	V	M	T	L	Y	A	Q	G	V	L	T	P	N	E	W	L	D	L	G	G	L	S	S	L	S	A	E	E	Y	F	G	A	S	L	W	Q	L	Y	K	S	I	D	S	P
Query Conservation														.	.	.
Alig confidence														.	.	.																		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	D	E	L	D	S	V	N	E	E	V	Y	K	I	T	G	K	Q	D	N	L	Y	L	R	P	P	R	G	V	F	S	.	E	Y	V	L	K	E	T	K	R	L	G	Y	Q	T	V	F	W	S	V	A	F	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		S										G	G	G				.										T	T							S	B			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																										.							.
Query SS confidence																																										.							.
Query Sequence		Y	K	A	V	L	K	T	L	L	L	E	A	Y	S	W	E	Y	P	N	P	R	L	L	A	K	D	I	K	Q	R	L	H	D	G	E	I	V	S	F	G	.	L	D	P	Y	C	M	.	M	L	E	R	V	T	E	Y	L	T	A	I	E
Query Conservation																																										.							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																														.							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	W	K	I	N	N	Q	K	G	K	K	Y	A	Y	D	H	M	I	K	Q	A	H	P	G	A	I	Y	L	L	H	T	V	S	R	D	N	A	E	A	L	D	D	A	I	T	D	L	K	K	Q	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.			T	T															T			T	T							S		S	T	T															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions