Return to main results Retrieve Phyre Job Id

Job DescriptionP00936
Confidence52.19%DateThu Jan 5 10:57:15 GMT 2012
Rank20Aligned Residues75
% Identity21%Templatec1u0mA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:putative polyketide synthase; PDBTitle: crystal structure of 1,3,6,8-tetrahydroxynaphthalene synthase (thns)2 from streptomyces coelicolor a3(2): a bacterial type iii polyketide3 synthase (pks) provides insights into enzymatic control of reactive4 polyketide intermediates
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.........170.........180.......
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  GQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLENWAASLGVEVSFFLIDENRFRHNESGSLGGEDCGSTQHILLLDEFY
Query Conservation 


  







    
       
  
   
  

   
 







   

         
 





 






Alig confidence 
















............













.......





























Template Conservation   

   


  
 
   ............          


 .......          
   

  


    
    
Template Sequence  HGWDASDLDFYIVHAGG. . . . . . . . . . . . PRILDDLSTFLEVD. . . . . . . PHAFRFSRATLTEYGNIASAVVLDALRRLF
Template Known Secondary structure  TS

SS

S


S............S
S
.......GGGGT
B
TT
Template Predicted Secondary structure 








............



.......






Template SS confidence 















































































   257..260.........270... ......280....... ..290.........300.........310.......
 
   188.190.........200.
Predicted Secondary structure 




Query SS confidence 













Query Sequence  RTAVRLAGKRILWN
Query Conservation 



 



 



Alig confidence 













Template Conservation         
  


 
Template Sequence  DEGGVEEGARGLLA
Template Known Secondary structure  S



SS


Template Predicted Secondary structure 






Template SS confidence 













   318.320.........330.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions