Return to main results Retrieve Phyre Job Id

Job DescriptionP00936
Confidence19.51%DateThu Jan 5 10:57:15 GMT 2012
Rank77Aligned Residues8
% Identity63%Templatec1icfB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein (cathepsin l: light chain); PDBTitle: crystal structure of mhc class ii associated p41 ii fragment in2 complex with cathepsin l
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   597..600....
Predicted Secondary structure 


Query SS confidence 







Query Sequence  LYRNSWNE
Query Conservation 
  


 
Alig confidence 







Template Conservation 






 
Template Sequence  LVKNSWGE
Template Known Secondary structure 
SS
T
Template Predicted Secondary structure 



Template SS confidence 







   184.....190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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