Job Description P17315 Confidence 95.68% Date Thu Jan 5 11:36:04 GMT 2012 Rank 23 Aligned Residues 110 % Identity 12% Template c3nb3C_ PDB info PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components Resolution 19.00 Å

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		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.					.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		G	V	E	T	E	L	K	I	P	F	N	D	E	W	K	L	S	I	N	Y	T	Y	N	D	G	R	D	V	S	N	G	E	N	K	P	L	S	D	L	P	F	H	T	A	N	G	T	L	D	W	K	P	L	A	L	E	D	W	S	.	.	.	.	F	Y	V	S	G	H	Y	T	G	Q	K	R	A	D	S	A	T
Query Conservation																																																													.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.
Template Sequence		G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	P	Y	A	Y	K	A	.	.	.	.	.	.	.	.	.	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	Y	S	N	V	Y	G	K
Template Known Secondary structure													T	T																				.	.	.	.	.	.	.	.	.													S	S	S	S																			S	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	T	P	G	G	Y	T	I	W	N	T	G	A	A	W	Q	V	T	K	D	V	K	L	R	A	G	V	L	N	L	G	D	K	D	L	S	R	D	D	Y	S	Y	N	E	D	G	R	R	Y	F	M	A	V	D	Y	R	F
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure																					T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions