Job Description P17315 Confidence 100.00% Date Thu Jan 5 11:36:04 GMT 2012 Rank 8 Aligned Residues 599 % Identity 19% Template c3fhhA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane heme receptor shua; PDBTitle: crystal structure of the heme/hemoglobin outer membrane2 transporter shua from shigella dysenteriae Resolution 2.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		E	T	M	V	V	T	A	S	S	V	E	Q	N	L	K	D	A	P	A	S	I	S	V	I	T	Q	E	D	L	Q	R	K	P	V	Q	N	L	K	D	V	L	K	E	V	P	G	V	Q	L	T	N	E	G	D	N	R	K	G	.	V	S	I	R	G	L	D	S	S	Y	T	L	I	L	V	D	G	K	R	V	N
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		E	T	M	T	V	T	A	T	G	N	A	R	S	S	F	E	A	P	M	M	V	S	V	I	D	T	S	A	P	E	N	Q	T	A	T	S	A	T	D	L	L	R	H	V	P	G	I	T	L	D	G	T	G	R	T	N	G	Q	D	I	N	M	R	G	Y	D	H	R	G	V	L	V	L	V	D	G	I	R	Q	G
Template Known Secondary structure						S	T	T	T	S	S				S	T	T	S	S	S							T	T	S	T	T	T	T	T			S	G	G	G	G	G	T	T	S	T	T					S		S	S	S	T	T						T	T	B		G	G	G						T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	N	A	V	F	R	H	N	D	F	D	L	N	W	I	P	V	D	S	I	E	R	I	E	V	V	R	G	P	M	S	S	L	Y	G	S	D	A	L	G	G	V	V	N	I	I	T	K	K	I	G	Q	K	W	S	G	T	V	T	V	D	T	T	I	Q	E	H	R	D	R	G	D	T	Y	N	G	Q	F	F
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		T	D	.	.	.	.	.	T	G	H	L	N	G	T	F	L	D	P	A	L	I	K	R	V	E	I	V	R	G	P	S	A	L	L	Y	G	S	G	A	L	G	G	V	I	S	Y	D	T	V	D	A	K	D	L	L	Q	E	G	Q	S	S	G	F	R	V	F	G	T	G	G	T	G	D	H	S	L	G	L	G	A
Template Known Secondary structure				.	.	.	.	.		S	S								G	G	G									S				T	T	T		T	T		S	S																	S	S	S											T	T	T	T
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		82	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		T	S	G	P	L	I	D	G	V	L	G	M	K	A	Y	G	S	L	A	K	R	E	K	D	D	P	Q	N	S	T	T	.	.	.	.	T	D	T	G	E	T	P	R	I	E	G	F	S	S	R	D	G	N	V	E	F	A	W	T	P	N	Q	N	H	D	F	T	A	G	Y	G	F	D	R	Q	D	R	D	S	D
Query Conservation																																	.	.	.	.
Alig confidence																																	.	.	.	.
Template Conservation
Template Sequence		S	A	F	G	R	T	E	N	L	D	G	I	V	A	W	S	S	R	D	R	G	D	L	R	Q	S	N	G	E	T	A	P	N	D	E	S	I	N	N	M	L	A	K	G	T	W	Q	I	D	S	A	Q	S	L	S	G	L	V	R	Y	Y	N	N	D	A	R	E	P	K	N	P	Q	T	V	E	A	S	E	S	S
Template Known Secondary structure								S	S															B			S	S	S			B																	S	S	S	S																		S	S	T	T	S	S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	K	N	R	L	E	R	Q	N	Y	S	V	S	H	N	G	R	W	D	Y	G	T	S	E	L	K	Y	Y	G	E	K	V	E	N	K	N	P	G	N	S	S	P	I	T	S	E	S	N	T	V	D	G	K	Y	T	L	P	L	T	A	I	N	Q	F	L	T	V	G	G	E	W	R	H	D	K	L	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	M	V	D	R	S	T	I	Q	R	D	A	Q	L	S	Y	K	L	A	P	Q	G	N	D	W	L	N	A	D	A	K	I	Y	W	S	E	V	R	I	N	A	Q	E	Y	R	E	Q	I	T	K	G	A	R	L	E	N	R	S	T	L	F	A	D	S	F	A	S	H	L	L	T	Y	G	G	E	Y	Y	R	Q
Template Known Secondary structure		S																					T	T		S	S																																				S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.										.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.
Query Sequence		A	V	N	L	T	G	G	T	S	S	K	T	S	A	S	Q	Y	A	L	F	V	E	D	E	W	R	I	F	E	P	L	A	L	T	T	G	V	R	.	.	.	.	.	.	.	.	.	M	D	D	H	E	T	Y	G	E	H	W	S	P	R	A	Y	L	V	Y	N	A	T	D	T	V	T	V	K	G	G	W	A	T
Query Conservation																																								.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Q	G	S	H	T	T	G	F	P	Q	A	K	I	D	F	S	S	G	W	L	Q	D	E	I	T	L	R	D	L	P	I	T	L	L	G	G	T	R	Y	D	S	Y	R	G	S	S	D	G	Y	K	D	V	D	A	D	K	W	S	S	R	A	G	M	T	I	N	P	T	N	W	L	M	L	F	G	S	Y	A	Q
Template Known Secondary structure									S																				S	S	S	S																	S	S	S																		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		417	.	.	420	.	.	.	.	.	.					.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		A	F	K	A	P	S	L	L	Q	L	.	.	.	.	S	P	D	W	T	S	N	S	C	R	G	A	C	K	I	V	G	S	P	D	L	K	P	E	T	S	E	S	W	E	L	G	L	Y	Y	M	G	E	E	G	W	L	E	G	V	E	S	S	V	T	V	F	R	N	D	V	K	D	R	I	S	I	S	R	T	S
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		A	F	R	A	P	T	M	G	E	M	Y	N	D	S	K	H	F	S	I	G	R	F	Y	T	N	Y	W	V	P	N	P	N	L	R	P	E	T	N	E	T	Q	E	Y	G	F	G	L	R	F	D	D	L	M	L	S	N	D	A	L	E	F	K	A	S	Y	F	D	T	K	A	K	D	Y	I	S	T	T	V	D	F
Template Known Secondary structure															S					S	S	S	S									T	T																			S		T	T																										G
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	N	A	A	P	G	Y	Q	N	F	V	G	F	E	T	G	A	N	G	R	R	I	P	V	F	S	Y	Y	N	V	N	K	A	R	I	Q	G	V	E	T	E	L	K	I	P	F	N	D	E	W	K	L	S	I	N	Y	T	Y	N	D	G	R	D	V	S	N	G	E	N	K	P	L	S	D	L	P	F	H	T
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																					.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																					.	.
Template Sequence		A	A	A	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	Y	N	V	P	N	A	K	I	W	G	W	D	V	M	T	K	Y	T	.	T	D	L	F	S	L	D	V	A	Y	N	R	T	R	G	K	D	T	D	T	.	.	G	E	Y	I	S	S	I	N	P	D	T
Template Known Secondary structure		G	G	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.		S	S															T	T	T	.	.			B		S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																					.	.
Template SS confidence
		493	.	.	.	.																						.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.			.	.	540	.	.	.	.	.	.	.	.
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.				.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		A	N	G	T	L	D	W	K	P	L	A	L	E	D	W	S	F	Y	V	S	G	H	Y	T	G	Q	K	R	A	D	S	A	T	A	K	T	P	G	G	Y	T	I	W	N	T	G	A	A	W	Q	V	T	.	.	.	K	D	V	K	L	R	A	G	V	L	N	L	G	D	K	D	L	S	R	D	D	Y	S	Y	N
Query Conservation																																																						.	.	.
Alig confidence													.																		.	.	.																					.	.	.																						.
Template Conservation													.																		.	.	.																																													.
Template Sequence		V	T	S	T	L	N	I	P	I	A	H	.	S	G	F	S	V	G	W	V	G	T	F	A	D	R	S	T	H	.	.	.	I	S	S	K	Q	P	G	Y	G	V	N	D	F	Y	V	S	Y	Q	G	Q	Q	A	L	K	G	M	T	T	T	L	V	L	G	N	A	F	D	K	E	Y	W	S	P	Q	.	G	I	P
Template Known Secondary structure											T	T	.	S	S																.	.	.																					G	G	G	T	T									S	T	T					B		T	T	.	S		B
Template Predicted Secondary structure													.																		.	.	.																																													.
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.				.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620		.	.	.
		650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	G	R	R	Y	F	M	A	V	D	Y	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	G	R	N	G	K	I	F	V	S	Y	Q	W
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		627	.	.	630	.	.	.	.	.	.	.	.	.	640