Return to main results Retrieve Phyre Job Id

Job DescriptionP17315
Confidence3.24%DateThu Jan 5 11:36:04 GMT 2012
Rank95Aligned Residues22
% Identity27%Templatec3fcgB_
PDB info PDB header:membrane protein, protein transportChain: B: PDB Molecule:f1 capsule-anchoring protein; PDBTitle: crystal structure analysis of the middle domain of the2 caf1a usher
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.... .....100.........110
Predicted Secondary structure  ..









Query SS confidence 





. .















Query Sequence  VSIRGL. . DSSYTLILVDGKRVNS
Query Conservation 
 


 ..      
 


     
Alig confidence 





..















Template Conservation 
 
 
 
   
 
 
 


  

 
Template Sequence  PVVRGIARTQARVEVLRDGYTVSN
Template Known Secondary structure 

SSSTT
Template Predicted Secondary structure 






Template SS confidence 























   247..250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions