Job Description P17315 Confidence 27.04% Date Thu Jan 5 11:36:04 GMT 2012 Rank 41 Aligned Residues 128 % Identity 13% Template c3a2rX_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein ii; PDBTitle: crystal structure of outer membrane protein porb from neisseria2 meningitidis Resolution 2.30 Å

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		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	A	R	I	Q	G	V	E	T	E	L	K	I	P	F	N	D	E	W	K	L	S	I	N	Y	T	Y	N	D	G	R	D	V	S	N	G	E	N	K	P	L	S	D	L	P	F	H	T	A	N	G	T	L	D	W	K	P	L	A	L	E	D	W	S	F	Y	V	S	G	H	Y	T	G	Q	K	R	A	D	S
Query Conservation
Alig confidence																				.																											.													.	.	.
Template Conservation																				.																											.													.	.	.
Template Sequence		P	V	K	D	Y	Q	V	H	R	V	V	A	G	Y	D	A	N	D	.	L	Y	V	S	V	A	G	Q	Y	E	A	A	K	N	N	E	V	G	S	I	K	G	K	K	H	E	.	Q	T	Q	V	A	A	T	A	A	Y	R	F	.	.	.	G	N	V	T	P	R	V	S	Y	A	H	G	F	K	A	K	V	N	G
Template Known Secondary structure																		T	T	.																S	S	S	T	T	T	T					.												B	.	.	.	T	T																T	T
Template Predicted Secondary structure																				.																											.													.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.		.	.	.	.	.	660	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		A	T	A	K	T	P	G	G	Y	T	I	W	N	T	G	A	A	W	Q	V	T	K	D	V	K	L	R	A	G	V	L	N	L	G	D	K	D	L	S	R	D	D	Y	S	Y	N	E	D	G	R	R	.	Y	F	M	A	V	D	Y	R	F
Query Conservation																																																					.
Alig confidence									.																								.	.	.	.	.	.															.
Template Conservation									.																								.	.	.	.	.	.
Template Sequence		V	K	D	A	N	Y	Q	.	Y	D	Q	V	I	V	G	A	D	Y	D	F	S	K	R	T	S	A	L	V	S	A	G	.	.	.	.	.	.	W	L	K	Q	G	K	G	A	G	K	V	E	Q	T	A	S	M	V	G	L	R	H	K	F
Template Known Secondary structure					G	G	G		.												S	S	S	S									.	.	.	.	.	.					S	S	T	T	S
Template Predicted Secondary structure									.																								.	.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions