Job Description P17315 Confidence 5.96% Date Thu Jan 5 11:36:04 GMT 2012 Rank 65 Aligned Residues 114 % Identity 14% Template c2y0lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo Resolution 2.59 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	L	K	I	P	F	N	D	E	W	K	L	S	I	N	Y	T	Y	N	D	G	R	D	V	S	N	G	E	N	K	P	L	S	D	L	P	F	H	T	A	N	G	T	L	D	W	K	P	L	A	L	E	D	W	S	F	Y	V	S	G	H	Y	T	G	Q	K	R	A	D	S	A	T	A	K	T	P	G	G	Y
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		G	G	L	D	Y	K	L	T	D	Q	L	T	A	S	Y	H	Y	S	N	L	Q	D	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	H	F	V	G	L	L	H	S	W	P	I	G	P	.	G	E	L	T	S	D	L	R	F	A	R	S	T	D	S	G	S	A	K	A	G	G	I	D	N	K
Template Known Secondary structure									S	S	S											T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	S	.	S															T	T		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.															.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		613	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.															.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	W	N	T	G	A	A	W	Q	V	T	K	D	V	K	L	R	A	G	V	L	N	L	G	D	K	D	L	S	R	D	D	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	E	D	G	R	R	Y	F	M	A	V	D	Y	R	F
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.										.
Template Sequence		S	.	L	N	G	M	F	T	Y	S	L	.	G	N	H	A	F	G	A	A	W	Q	R	M	N	G	D	D	A	F	P	Y	L	E	G	S	N	P	Y	L	V	N	F	V	Q	V	N	D	F	A	G	P	K	E	R	S	W	Q	L	R	Y	D	Y	D	F
Template Known Secondary structure			.										.	T	T												S	S	S					B	T	T						T	T			S	S					S	T	T												G
Template Predicted Secondary structure			.										.
Template SS confidence
		259		260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions