Job Description Q47710 Confidence 1.71% Date Thu Jan 5 12:37:08 GMT 2012 Rank 56 Aligned Residues 33 % Identity 15% Template c3t97B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:nuclear pore complex protein nup54; PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup62/nup54 Resolution 2.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	R	E	R	R	K	A	Q	L	L	S	Q	I	Q	Q	Q	R	L	D	L	S	A	S	R	R	E	W	L	E	T	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	L	Q	K	N	Q	T	T	T	M	A	K	I	A	Q	Y	K	R	K	L	M	D	L	S	H	R	T	L	Q	V	L	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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